this repo has no description
feat:added diagnostic report context builder (#3480)
authored by
Nandkishor R
and committed by
GitHub
2b5f733e
294670cd
+144
-93
+38
care/emr/reports/context_builder/data_points/diagnostic_report.py
+38
care/emr/reports/context_builder/data_points/diagnostic_report.py
···
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from care.emr.models.diagnostic_report import DiagnosticReport
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from care.emr.reports.context_builder.data_points.base import (
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Field,
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QuerysetContextBuilder,
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)
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from care.emr.reports.context_builder.data_points.observation import (
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ObservationContextBuilder,
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)
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class DiagnosticReportContextBuilder(QuerysetContextBuilder):
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def get_context(self):
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return DiagnosticReport.objects.filter(encounter=self.parent_context)
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+
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title = Field(
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display="Title",
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preview_value="Chest X-Ray Report",
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description="Title of the diagnostic report",
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mapping=lambda dr: dr.code.get("display")
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if dr.code and dr.code.get("display")
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else "",
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)
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observations = Field(
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display="Observations",
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preview_value="",
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description="Observations summary included in the diagnostic report",
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target_context=ObservationContextBuilder,
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)
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conclusion = Field(
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display="Conclusion",
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preview_value="No abnormalities detected.",
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description="Conclusion of the diagnostic report",
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)
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note = Field(
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display="Notes",
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preview_value="Patient is in good health.",
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description="Additional notes regarding the diagnostic report",
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)
+22
-7
care/emr/reports/context_builder/data_points/encounter.py
+22
-7
care/emr/reports/context_builder/data_points/encounter.py
···
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from care.emr.reports.context_builder.data_points.diagnosis import (
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DiagnosisContextBuilder,
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)
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from care.emr.reports.context_builder.data_points.diagnostic_report import (
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DiagnosticReportContextBuilder,
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)
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from care.emr.reports.context_builder.data_points.facility import FacilityContextBuilder
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from care.emr.reports.context_builder.data_points.medication import (
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MedicationPrescriptionContextBuilder,
···
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)
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from care.emr.reports.context_builder.data_points.questionnaire import (
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QuestionnaireContextBuilder,
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-
)
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-
from care.emr.reports.context_builder.data_points.service_request import (
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ServiceRequestDataPointBuilder,
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)
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from care.emr.reports.context_builder.data_points.symptom import SymptomsContextBuilder
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from care.emr.reports.context_builder.data_points.user import SingleUserIdContextBuilder
···
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description="Details of the patient associated with the encounter",
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)
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service_requests = Field(
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display="Service Requests",
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target_context=ServiceRequestDataPointBuilder,
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diagnostic_reports = Field(
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display="Diagnostic Reports",
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preview_value="",
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description="Service requests associated with the encounter",
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description="Diagnostic reports associated with the encounter",
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target_context=DiagnosticReportContextBuilder,
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)
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facility = Field(
···
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target_context=EncounterFacilityLocationContextBuilder,
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preview_value="",
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description="Current location within the facility for the encounter",
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)
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start_time = Field(
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display="Encounter Start Time",
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mapping=lambda e: e.period.get("start") if e.period else None,
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preview_value="2026-01-12T10:01:45.088000Z",
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description="Start time of the encounter",
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)
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end_time = Field(
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display="Encounter End Time",
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mapping=lambda e: e.period.get("end")
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if e.period and e.period.get("end")
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else "Ongoing",
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preview_value="2026-01-12T10:01:45.088000Z",
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description="End time of the encounter",
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)
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+84
care/emr/reports/context_builder/data_points/observation.py
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care/emr/reports/context_builder/data_points/observation.py
···
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from care.emr.reports.context_builder.data_points.base import (
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Field,
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QuerysetContextBuilder,
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SingleObjectContextBuilder,
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)
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from care.emr.resources.observation.spec import Observation
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+
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class ObservationValueContextBuilder(SingleObjectContextBuilder):
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def get_context(self):
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return getattr(self.parent_context, self.parent_attribute)
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value = Field(
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display="Observation Value",
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preview_value="12",
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mapping=lambda o: o.get("value") if o and o.get("value") else None,
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description="The value of the observation recorded",
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)
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+
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unit = Field(
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display="Observation Unit",
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preview_value="%",
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mapping=lambda o: o.get("unit").get("code")
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if o and o.get("unit") and o.get("unit").get("code")
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else None,
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description="The unit of measurement for the observation",
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)
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+
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class ObservationComponentContextBuilder(QuerysetContextBuilder):
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def get_context(self):
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return self.parent_context.component
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title = Field(
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display="Observation Component Title",
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preview_value="Hemoglobin A1c",
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mapping=lambda o: o.get("code").get("display")
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if o and o.get("code") and o.get("code").get("display")
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else "",
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description="The code representing the observation",
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)
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result = Field(
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display="Observation Component Result",
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preview_value="",
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target_context=ObservationValueContextBuilder,
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description="The result value of the observation component",
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)
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class ObservationContextBuilder(QuerysetContextBuilder):
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def get_context(self):
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return Observation.objects.filter(diagnostic_report=self.parent_context)
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title = Field(
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display="Observation Title",
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preview_value="Blood Glucose Level",
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mapping=lambda o: o.main_code.get("display")
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if o.main_code and o.main_code.get("display")
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else "",
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description="The code representing the observation",
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)
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value = Field(
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display="Observation Value",
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preview_value="",
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target_context=ObservationValueContextBuilder,
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description="The value of the observation recorded",
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)
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component = Field(
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display="Observation Component",
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preview_value="",
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target_context=ObservationComponentContextBuilder,
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description="Components of the observation",
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)
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status = Field(
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display="Observation Status",
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preview_value="final",
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description="The status of the observation",
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)
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+
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effective_datetime = Field(
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display="Effective DateTime",
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preview_value="2023-10-01T10:00:00Z",
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description="The date and time when the observation was made",
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)
-86
care/emr/reports/context_builder/data_points/service_request.py
-86
care/emr/reports/context_builder/data_points/service_request.py
···
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from django_filters import rest_framework as filters
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from care.emr.models.service_request import ServiceRequest
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from care.emr.reports.context_builder.data_points.base import (
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Field,
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QuerysetContextBuilder,
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)
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from care.emr.reports.context_builder.data_points.user import (
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SingleUserRelatedContextBuilder,
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)
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STATUS_CHOICE = {
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"draft": "Draft",
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"active": "Active",
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"on_hold": "On Hold",
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"entered_in_error": "Entered in Error",
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"ended": "Ended",
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"completed": "Completed",
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"revoked": "Revoked",
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}
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INTENT_CHOICE = {
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"proposal": "Proposal",
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"plan": "Plan",
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"directive": "Directive",
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"order": "Order",
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}
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CATEGORY_CHOICE = {
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"laboratory": "Laboratory",
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"imaging": "Imaging",
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"counselling": "Counselling",
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"surgical_procedure": "Surgical Procedure",
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}
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class ServiceRequestReportFilterSet(filters.FilterSet):
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status = filters.CharFilter(field_name="status", lookup_expr="iexact")
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intent = filters.CharFilter(field_name="intent", lookup_expr="iexact")
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category = filters.CharFilter(field_name="category", lookup_expr="iexact")
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priority = filters.CharFilter(field_name="priority", lookup_expr="iexact")
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class ServiceRequestDataPointBuilder(QuerysetContextBuilder):
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filterset_class = ServiceRequestReportFilterSet
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__filterset_backends__ = [filters.DjangoFilterBackend]
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title = Field(
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display="Title",
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preview_value="Complete Blood Count",
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description="Title of the service request",
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)
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status = Field(
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display="Status",
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preview_value="Active",
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mapping=lambda sr: STATUS_CHOICE.get(sr.status, sr.status.title())
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if sr.status
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else "",
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description="Current status of the service request",
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)
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intent = Field(
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display="Intent",
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preview_value="Order",
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mapping=lambda sr: INTENT_CHOICE.get(sr.intent, sr.intent.title())
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if sr.intent
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else "",
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description="Intent of the service request",
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)
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category = Field(
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display="Category",
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preview_value="Laboratory",
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mapping=lambda sr: CATEGORY_CHOICE.get(sr.category, sr.category.title())
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if sr.category
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else "",
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description="Category of the service request",
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)
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requester = Field(
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display="Requester",
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target_context=SingleUserRelatedContextBuilder,
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preview_value="",
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description="User who requested the service",
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)
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def get_context(self):
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return ServiceRequest.objects.filter(encounter=self.parent_context)