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+122

docs/user-flow.md

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··· 1 1 + # BrainWaves User Flow 2 2 + 3 3 + This document describes the user flow through the BrainWaves application — an Electron desktop app for conducting EEG neuroscience experiments. 4 4 + 5 5 + ## Flow Diagram 6 6 + 7 7 + ```mermaid 8 8 + flowchart TD 9 9 + HOME["🏠 HOME"] 10 10 + HOME --> MY_EXP["MY EXPERIMENTS\n(saved workspaces)"] 11 11 + HOME --> EXP_BANK["EXPERIMENT BANK\n(built-in cards)"] 12 12 + HOME --> EXPLORE["EXPLORE EEG DATA\n(raw streaming)"] 13 13 + 14 14 + MY_EXP -->|"Open Experiment"| DESIGN 15 15 + EXP_BANK -->|"Pick card → Overview → Start"| DESIGN 16 16 + 17 17 + EXPLORE --> CONNECT_MODAL_EXP["ConnectModal\n(find & connect device)"] 18 18 + CONNECT_MODAL_EXP --> EEG_EXPLORE["Live EEG Viewer\n(signal quality + waveform)"] 19 19 + 20 20 + subgraph DESIGN ["📋 DESIGN /design"] 21 21 + direction TB 22 22 + D_OV["OVERVIEW\n(title, description)"] 23 23 + D_BG["BACKGROUND\n(framing questions, resources)"] 24 24 + D_PR["PROTOCOL\n(step-by-step, condition images)"] 25 25 + D_PV["PREVIEW\n(live experiment iframe)"] 26 26 + D_OV --> D_BG --> D_PR --> D_PV 27 27 + EEG_TOGGLE["Enable/Disable EEG toggle"] 28 28 + end 29 29 + 30 30 + DESIGN -->|"Top nav: Collect"| COLLECT 31 31 + 32 32 + subgraph COLLECT ["🎧 COLLECT /collect"] 33 33 + direction TB 34 34 + PRE_TEST["PRE-TEST\n(signal quality + EEG viewer)"] 35 35 + CONNECT_MODAL["ConnectModal\n① power on headset\n② plug in USB receiver\n③ select device → connect"] 36 36 + PRE_TEST -->|"EEG enabled & not connected"| CONNECT_MODAL 37 37 + CONNECT_MODAL -->|"Connected"| PRE_TEST 38 38 + PRE_TEST -->|"Run & Record"| RUN 39 39 + RUN["RUN\n(subject ID / group / session)"] 40 40 + EXP_WINDOW["ExperimentWindow\n(full-screen lab.js iframe\n+ EEG timing markers)"] 41 41 + RUN -->|"Run Experiment"| EXP_WINDOW 42 42 + EXP_WINDOW -->|"Experiment complete\n(behavioral CSV saved)"| DONE_COLLECT["Recording saved ✓"] 43 43 + end 44 44 + 45 45 + DONE_COLLECT -->|"EEG enabled\nTop nav: Clean"| CLEAN 46 46 + DONE_COLLECT -->|"Behavior only\nTop nav: Analyze"| ANALYZE 47 47 + 48 48 + subgraph CLEAN ["🧹 CLEAN /clean\n(EEG only)"] 49 49 + direction TB 50 50 + CL_SEL["Select subject\n+ select recording(s)"] 51 51 + CL_LOAD["Load Dataset\n(Pyodide → epoch stats)"] 52 52 + CL_CLEAN["Clean Data\n(artifact rejection in Pyodide)"] 53 53 + CL_SEL --> CL_LOAD --> CL_CLEAN 54 54 + end 55 55 + 56 56 + CLEAN -->|"Analyze Dataset →"| ANALYZE 57 57 + 58 58 + subgraph ANALYZE ["📊 ANALYZE /analyze"] 59 59 + direction TB 60 60 + AN_OV["OVERVIEW\n(topoplot — scalp map)"] 61 61 + AN_ERP["ERP\n(waveform by electrode)"] 62 62 + AN_BEH["BEHAVIOR\n(RT / Accuracy charts\nbar · box · scatter)"] 63 63 + AN_EXP["Export aggregated data"] 64 64 + AN_OV --> AN_ERP 65 65 + AN_ERP --> AN_BEH 66 66 + AN_BEH --> AN_EXP 67 67 + end 68 68 + 69 69 + DESIGN -->|"Home button"| HOME 70 70 + COLLECT -->|"Home button"| HOME 71 71 + CLEAN -->|"Home button"| HOME 72 72 + ANALYZE -->|"Home button"| HOME 73 73 + 74 74 + style HOME fill:#4A90D9,color:#fff 75 75 + style DESIGN fill:#7B68EE,color:#fff 76 76 + style COLLECT fill:#E8763A,color:#fff 77 77 + style CLEAN fill:#3BAF7A,color:#fff 78 78 + style ANALYZE fill:#D95B5B,color:#fff 79 79 + ``` 80 80 + 81 81 + ## Stage Descriptions 82 82 + 83 83 + ### 1. Home (`/` and `/home`) 84 84 + 85 85 + Entry point with three tabs: 86 86 + 87 87 + - **My Experiments** — table of previously saved workspaces; each row has Delete, Go to Folder, and Open Experiment actions. 88 88 + - **Experiment Bank** — card grid of four built-in EEG paradigms: Faces/Houses (N170), Stroop Task, Multi-tasking, and Visual Search. Clicking a card opens an Overview panel before starting. 89 89 + - **Explore EEG Data** — connects directly to a headset and streams live EEG without running a formal experiment. 90 90 + 91 91 + ### 2. Design (`/design`) 92 92 + 93 93 + Four review tabs walk the researcher through the experiment before data collection: 94 94 + 95 95 + | Tab | Content | 96 96 + |---|---| 97 97 + | **Overview** | Title and experiment description | 98 98 + | **Background** | Framing questions and external reading resources | 99 99 + | **Protocol** | Step-by-step instructions with condition images | 100 100 + | **Preview** | Live experiment iframe (lab.js) | 101 101 + 102 102 + An **Enable EEG** toggle controls whether the Clean step appears downstream. Custom experiments have additional tabs for configuring conditions, trials, timing parameters, and instructions. 103 103 + 104 104 + ### 3. Collect (`/collect`) 105 105 + 106 106 + Two sub-views: 107 107 + 108 108 + - **Pre-Test** — walks the user through `ConnectModal` (power on headset → plug in USB receiver → select device → connect), then shows live signal quality and a real-time EEG waveform. 109 109 + - **Run** — collects subject ID, group name, and session number, then launches the experiment in a full-screen iframe. EEG timing markers are injected during the task. On completion, the behavioral CSV is saved automatically. 110 110 + 111 111 + ### 4. Clean (`/clean`) — EEG only 112 112 + 113 113 + Shown only when EEG is enabled. 114 114 + 115 115 + 1. Select a subject and one or more recordings. 116 116 + 2. **Load Dataset** — loads epochs into Pyodide (Python-in-browser) and returns epoch statistics. 117 117 + 3. **Clean Data** — runs artifact rejection via Pyodide. Once the drop percentage reaches a threshold, the *Analyze Dataset* button becomes available. 118 118 + 119 119 + ### 5. Analyze (`/analyze`) 120 120 + 121 121 + - **EEG mode** — three tabs: topoplot (scalp map overview), ERP waveforms per electrode, and behavioral analysis. 122 122 + - **Behavior-only mode** — one tab: interactive bar, box, or scatter plots for response time or accuracy, with an outlier-removal option and an export button.

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+17 -11

package.json

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+4 -31

src/main/index.ts

reviewed

··· 17 17 import MenuBuilder from './menu'; 18 18 import { FILE_TYPES } from '../renderer/constants/constants'; 19 19 20 20 - // Chrome extension IDs for React and Redux DevTools 21 21 - const REACT_DEVTOOLS_ID = 'fmkadmapgofadopljbjfkapdkoienihi'; 22 22 - const REDUX_DEVTOOLS_ID = 'lmhkpmbekcpmknklioeibfkpmmfibljd'; 23 23 - 24 20 // Needed for WASM/SharedArrayBuffer support (pyodide) 25 21 app.commandLine.appendSwitch( 26 22 'enable-experimental-web-platform-features', ··· 36 32 } 37 33 38 34 let mainWindow: BrowserWindow | null = null; 39 39 - 40 40 - const installExtensions = async () => { 41 41 - const forceDownload = !!process.env.UPGRADE_EXTENSIONS; 42 42 - const sess = session.defaultSession; 43 43 - const extDir = path.join(app.getPath('userData'), 'extensions'); 44 44 - 45 45 - const loadExt = async (id: string) => { 46 46 - const extPath = path.join(extDir, id); 47 47 - if (!fs.existsSync(extPath)) return; 48 48 - const existing = sess.extensions 49 49 - .getAllExtensions() 50 50 - .find((e) => e.id === id); 51 51 - if (existing && !forceDownload) return; 52 52 - if (existing) { 53 53 - sess.removeExtension(id); 54 54 - } 55 55 - await sess.extensions.loadExtension(extPath); 56 56 - }; 57 57 - 58 58 - await Promise.all([REACT_DEVTOOLS_ID, REDUX_DEVTOOLS_ID].map(loadExt)).catch( 59 59 - console.log 60 60 - ); 61 61 - }; 62 35 63 36 // ------------------------------------------------------------------ 64 37 // Filesystem helpers (mirroring renderer's storage.ts / write.ts) ··· 397 370 // ------------------------------------------------------------------ 398 371 399 372 const createWindow = async () => { 400 400 - if (is.dev || process.env.DEBUG_PROD === 'true') { 401 401 - await installExtensions(); 402 402 - } 403 373 404 374 mainWindow = new BrowserWindow({ 405 375 show: false, ··· 409 379 preload: path.join(__dirname, '../preload/index.js'), 410 380 nodeIntegration: false, 411 381 contextIsolation: true, 382 382 + sandbox: false, 412 383 webviewTag: true, 413 384 additionalArguments: [ 414 385 // Pass resource path so preload can inject it synchronously ··· 451 422 const menuBuilder = new MenuBuilder(mainWindow); 452 423 menuBuilder.buildMenu(); 453 424 454 454 - new AppUpdater(); 425 425 + if (app.isPackaged) { 426 426 + new AppUpdater(); 427 427 + } 455 428 }; 456 429 457 430 // ------------------------------------------------------------------

+3 -4

src/renderer/index.tsx

reviewed

··· 1 1 import React from 'react'; 2 2 - import { render } from 'react-dom'; 2 2 + import { createRoot } from 'react-dom/client'; 3 3 import Root from './containers/Root'; 4 4 import { configuredStore, history } from './store'; 5 5 import './app.global.css'; 6 6 7 7 const store = configuredStore(); 8 8 9 9 - render( 10 10 - <Root store={store} history={history} />, 11 11 - document.getElementById('root') 9 9 + createRoot(document.getElementById('root') as HTMLElement).render( 10 10 + <Root store={store} history={history} /> 12 11 );